Received: 6 January 2020  |  Accepted: 21 December 2020 DOI: 10.1111/pbr.12896 R E V I E W A R T I C L E Breeding maize (Zea mays) for Striga resistance: Past, current and prospects in sub-s aharan africa Abdoul- Madjidou Yacoubou1,2,3  | Nouhoun Zoumarou Wallis1 | Abebe Menkir2  | Valerien A. Zinsou1 | Alexis Onzo1 | Ana Luísa Garcia- Oliveira4 | Silvestro Meseka2 | Mengesha Wende2 | Melaku Gedil2  | Paterne Agre2 1Laboratoire de Phytotechnie, d’Amélioration et de Protection des Plantes Abstract (LaPAPP), Département des Sciences et Striga hermonthica, causes up to 100% yield loss in maize production in Sub-S aharan Techniques de Production Végétale (STPV), Faculté d’Agronomie, Université de Parakou, Africa. Developing Striga- resistant maize cultivars could be a major component of Parakou, Bénin integrated Striga management strategies. This paper presents a comprehensive over- 2International Institute of Tropical Agriculture view of maize breeding activities related to Striga resistance and its management. (IITA), Oyo Road, PMB 5320, Ibadan, Nigeria 3Institut National des Recherches Agricoles Scientific surveys have revealed that conventional breeding strategies have been du Bénin, 01 BP 884, Cotonou, Bénin used more than molecular breeding strategies in maize improvement for Striga re- 4Excellence in Breeding (EiB), CIMMYT, sistance. Striga resistance genes are still under study in the International Institute ICRAF House, UN Avenue, PO Box 1041-00621, Nairobi, Kenya for Tropical Agriculture (IITA) maize breeding programme. There is also a need to discover QTL and molecular markers associated with such genes to improve Striga Correspondence Abdoul- Madjidou Yacoubou, Laboratoire resistance in maize. Marker Assistance Breeding is expected to increase maize breed- de Phytotechnie, d’Amélioration et ing efficiency with complex traits such as resistance towards Striga because of the de Protection des Plantes (LaPAPP), Département des Sciences et Techniques complex nature of the host- parasite relationship and its intersection with other envi- de Production Végétale (STPV), Faculté ronmental factors. Conventional alongside molecular tools and technical controls are d’Agronomie, Université de Parakou, Parakou, Bénin. promising methods to effectively assess Striga in Sub- Saharan Africa. Email: abdoulmadjidou.yacoubou@yahoo.com K E Y W O R D S Funding information Bill and Melinda Gates Foundation breeding strategies, maize, QTL, resistance, Striga Communicated by: Thomas Lübberstedt 1  | INTRODUC TION most widespread stresses (Atera et al., 2013; Edmeades, 2013; Das et al., 2019). Maize is one of the most important cereal crops grown worldwide. Striga, is a parasitic weed belonging to the Orobanchaceae family. In Sub- Saharan Africa (SSA), it is regarded as the most important sta- It infests and reduces yields of many cereal crops including maize by ple crop with huge potential for addressing the challenge of food in- up to 100% (Atera et al., 2013; Chemisquy et al., 2010; Parker, 2012; security (Abdoulaye et al., 2018). However, its productivity remains Teka, 2014). Across the globe, more than 50 species belonging to the relatively low across SSA countries when comparing to the global Orobanchaceae family are identified and known as crop pests. In SSA, average production (FAO, 2018). Amongst the major constraints that S. hermonthica (Del.) Benth. and S. asiatica (L.) Kuntze are the most affect maize productivity, drought, low fertility and the parasitic weeds economically important species affecting maize production (Menkir known as Striga hermonthica, have been recognized by farmers as the et al., 2012; Teka, 2014). According to Parker (2012), the tropical This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. © 2021 The Authors. Plant Breeding published by Wiley- VCH GmbH Plant Breeding. 2021;140:195–210. wileyonlinelibrary.com/journal/pbr © 2021 Wiley- VCH GmbH  |  195 196  |     YACOUBOU et Al. semi- arid climatic conditions have allowed rapid development of the 2  | ECONOMIC IMPAC T OF Str iga Striga and even its adaptation to context. Unfortunately, S. hermonthica INFESTATION ON MAIZE PRODUC TION infestation appears to be worsening due to the current intensive land AND BIOLOGY OF Str iga spp. use, mono- cropping practices and human demographic pressure. All these factors lead to a continuous decline in soil fertility, which greatly 2.1 | Economic impact of Striga infestation on maize favours the Striga occurrence (Rich & Ejeta, 2008). In West Africa, production Striga is widely found across the region where maize yield losses due to infestation can vary from 20% to 80% ( Ejeta, 2007; Kim et al., 2002). Striga parasitism is a limiting factor to maize (Zea mays L.) cropping In the last few decades, efforts have been made to develop meth- in the savannah zones of Sub-S aharan Africa (SSA) which constitutes ods for Striga control, including agronomic cultural practice, biologi- the maize belt of the sub- region (Runo & Kuria, 2018). About 75% of cal control, chemical, host plant resistance and genetically modified cultivated land with maize in SSA is endemic to S. hermonthica (Akaogu crops. However, these strategies are only moderately effective, be- et al., 2019). Maize yield losses under severe Striga infestation can cause Striga are still expanding its natural range by causing more yield be as high as 100% (Figure 1) and are economically estimated to $7 losses. From existing strategies, the most effective and sustainable billion in the SSA alone (Spallek et al., 2013). The Striga problem has control seems to be an integrated approach that uses resistant cul- been worsened by the increasing mono- cropping practice instead of tivars (Chitagu et al., 2014; Hearne, 2009; Yoder & Scholes, 2010). rotation and intercropping systems, human demographic pressure on Striga- resistant maize can be a major component of integrated control available land where up to 300 million farmers were exposed to the if resistance is incorporated into adapted and, regionally productive Striga infestation in SSA (Badu- Apraku & Fakorede, 2017). Challenges cultivars. Resistant maize cultivars can, indeed, reduce both new Striga in managing Striga infestation lead to agricultural land abandonment seed production and the Striga seed bank in infested soils. Significant in several West African countries including Benin, Burkina Faso, Niger, progress towards the development of Striga- resistant maize variet- Nigeria and Togo (Atera & Itoh, 2011; Badu- Apraku, 2010; Badu- ies have been achieved around the world, particularly in Africa. The Apraku et al., 2014). Consequently, this has threatened food security International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria and livelihoods of millions farmers in most countries in this region and International Maize and Wheat Improvement Centre (CIMMYT), (Menkir et al., 2020). Zimbabwe, have developed several maize genotypes with varied Striga resistance levels and adapted to different eco- climatic conditions. Yet, very few of these varieties are effectively resistant to Striga, because, 2.2 | Biology and Striga spp. life cycle they are continuously tolerant to the emergence of Striga plants. Thus, adding each year more Striga seeds into the soil after each growing Life cycle of Striga is synchronized to that of its host and in- season. Therefore, additional genes or sources of Striga resistance volves mechanisms that coordinate lifecycles of both the para- need to be found for introgression into maize elite varieties in order site and the host (Bouwmeester et al., 2003). Striga life cycle to develop varieties that support little or no Striga emergence. This re- generally involves: germination, host attachment, formation of view intends to give a brief update on current work towards Striga re- haustoria, penetration and establishment of vascular connec- sistance emphasizing breeding methods for Striga resistance in Africa tions, nutrients accumulation, flowering and seed production and the use of integrated Striga control mechanisms on maize. (Parker & Riches, 1993) (Figure 2). Germination of Striga seeds F I G U R E 1   Maize field devastated by S. hermonthica in the North of Benin Republic Source: Yacoubou (2018) YACOUBOU et Al.      |  197 F I G U R E 2   The life cycle of S. hermonthica on a susceptible host. Stages indicated: A = after-r ipening and conditioning of S. hermonthica seed, B = germination of S. hermonthica seed, C = haustorial initiation and attachment of S. hermonthica to the host followed by a period of growth underground, D = emergence of S. hermonthica plants from the soil, E = flowering, insect pollination, seed set and dispersal. Duration of each phase of the life cycle is indicated. Source: Hearne (2001) [Colour figure can be viewed at wileyonlinelibrary.com] depends on the presence of hormones known as strigolactones Cultural practices such as manual weeding, push and pull, crop that are produced by the host and in other cases non- host species rotation with non- host intercrops (trap crops), fertilizer application, (Spallek et al., 2013). With the presence of strigolactones, para- soil and water management, and transplanting have been attempted, site seedlings attach to the host and form vascular connections but they offered limited success in controlling Striga infestation depriving it of its water, carbohydrates and minerals (Yoshida & (Oswald & Ransom, 2002; Fasil & Verkleij, 2007; Udom et al., 2007; Shirasu, 2009). Under stressful conditions plant roots exude str- Manyong et al., 2008; Ayongwa et al., 2010; Lagoke & Isah, 2010; igolactone hormone to promote symbiotic relationship with soil Hailu et al., 2018). Inter- cropping cereals with legumes is another microbes for mineral nutrient scavenging (Steven, 2014). Parasitic low-c ost and viable strategy that has been reported to influence plants such as Striga hermonthica have exploited these strigolac- Striga spp. infestation (Carsky et al., 2000; Akanvou et al., 2006; tone hormones as signals to stimulate the germination of their Kanampiu et al., 2018). Legumes, through their roots, fix atmo- seeds (Runo et al., 2012) (Figure 3). During early stages of seed de- spheric nitrogen, add organic matter to the soil by contributing to velopment, before emergence, the parasite depends totally on the soil conservation, preserving the streamline soil moisture and en- host plant (Webb & Smith, 1996). At this stage of subterranean de- hances soil biodiversity, thereby improving soil health and fertility, velopment, S. hermonthica inflicts maximum damage to the maize which directly contributes to Striga control. Intercropping legumes plant. The adverse effect of Striga on maize is manifested as stunt- with cereals reduces S. hermonthica but does not eliminate the para- ing, chlorotic and necrotic lesions on the leaves and reduction of site (Khan et al., 2000, 2007). ear size and grain yield (Adetimirin et al., 2000). Striga spp. take Other methods for Striga control include biological control using about 4–1 0 weeks to complete its life cycle after emergence and herbicide- resistant maize variety (Imazapyr treatment), develop- this completion usually occurs after harvest of the host (Ramaiah ment of Striga- resistant germplasm, use of fungus Fusarium isolation et al., 1983). by applying strigolactones (Kanampiu et al., 2002; Ejeta, 2007; Illa et al., 2010; Nzioki et al., 2016; Uraguchi et al., 2018; Zwanenburg, & Blanco- Ania, 2018; Kountche et al., 2019). All these approaches 2.3 | Striga control methods have been used with some degree of success to minimize the effect of Striga in maize production. The mode of action for each approach Striga control is essential to ensure food security in the SSA is different. For example, in the case of fungus, when F. oxysporum (Ejeta, 2007; Rodenburg et al., 2005). Several methods, ranging gets in contact with maize plants, there is a production of amino from agricultural practices to biological control exist and significant acids (L- leucine and L- tyrosine), that disrupt plant growth and de- progress has been made in Striga control research within Africa velopment. These amino acids are toxic to Striga plants but innoc- (Table 1). uous to maize plants (Nzioki et al., 2016). The use of this biological 198  |     YACOUBOU et Al. F I G U R E 3   Biological functions of strigolactones Source: Yamaguchi et al. (2010) [Colour figure can be viewed at wileyonlinelibrary. com] control tool allowed the increment of more than 45% maize yield in translocation suggests a possibility that RNA- interference (RNAi) Striga endemic zones in Kenya (Nzioki et al., 2016). Strigolactones could be used as a potential tool to interfere in vital processes within (SLs) reduce the accumulation of abscisic acid (ABA) in plant by the parasite by transforming the host with an RNAi construct that up- regulating the ABA catabolic enzyme gene CYP707A1 (Lechat targets gene sequences specific to the parasite (Shayanowako et al., et al., 2015; Toh et al., 2012). The ABA is released by maize infected 2017). This technique is constrained by the lack of genes to target with S. hermonthica, that subsequently trigger stomatal closure to for silencing as well as by the delivery of iRNAs into the parasite minimize water loss. SLs also increase the production of gibberellins (Kirigia et al., 2014). This constrain can be overcome using viral in- (GA) hormones by up-r egulating gibberellin3β- dioxygenase 1, which duced gene silencing (VIGS). Using a Tobacco Rattle Virus (TRV) – is involved in GA biosynthesis (Toh et al., 2015; Yao et al., 2016). VIGS system, Kirigia et al. (2014) have shown that this system works Although ABA and GA represent central plant hormones and are in S. hermonthica and has been proven as a useful system for candi- known to antagonistically regulate seed germination in non-p arasitic date gene validation either in parasite development or parasitism, for plants, the effects of their exogenous application vary across para- the development of resistant transgenic maize. sitic plant species. Zehhar et al. (2002) and Toh et al. (2015), reported that neither GA nor ABA alone is sufficient to stimulate or inhibit seed germination in S. hermonthica, while Kannan and Zwanenburg 3  | GENETIC S RESISTANCE MECHANISMS (2014) and Zwanenburg et al. (2016) reported SLs application appears TO Str iga IN MAIZE attractive owing to their decomposition in the soil within a short pe- riod. Nevertheless, the use of natural SLs for decomposition in soil 3.1 | Resistance mechanism to Striga in maize does not seem a realistic alternative because the synthesis of these compounds is very labourious. More recently, genetic engineering Striga resistance mechanisms act either before (preattachment) or has offered the promise of rapidly achieving resistance against Striga after physical contact with the host (postattachment). Preattachment spp. Recent findings have shown that RNAs freely translocate be- resistance (Figure 4a) occurs when a host produces low amounts of tween parasitic plants and their hosts (Kim & Westwood, 2015). This strigolactones or when Striga receptors that perceive germination YACOUBOU et Al.      |  199 TA B L E 1   Striga management methods used in African countries Factors in favour of control Methods options Setbacks for control options References Manual weeding Reduction of Striga seed Yield benefit is not immediate, Babiker (2007), Ayongwa et al. (2010) bank, easy to implement labour intensive Crop rotation Increase soil fertility, Benefit accruement requires time, costly as Carsky et al.(2000), Manyong reduction of Striga seed per family food et al. (2008) bank Hand pulling Reduction of Striga seed Inappropriate disposal increases seed bank Jamil et al. (2011), Oswald (2005) bank if performed before flowering, increase in yield Push and pull Provide livestock feed, Costly to implement initially, Khan et al. (2010), Hailu et al. (2018) reduction of Striga seed benefit accruement requires time, trap crop bank, control of stem borer, used uneconomical improvement of soil fertility Fertilizer Increase in yield, Costly to implement, labour Jamil et al. (2012) Application (N improvement of soil fertility, Intensive and P) reduction of Striga incidence Intercropping with Reduction of Striga seed Labour intensive, trap crop used Bilalis et al. (2010), Ibrahim et al. (2014), Legumes bank, increase soil fertility, uneconomical Hailu et al. (2018) provide additional income Seed dressing Increase in yield, easy to Purchase of seed every season is costly De Groote et al. (2008), Kanampiu et al. (herbicide) implement, Reduction of May not be easy to implement (2003) Striga incidence Compost Increase in yield, easy to Increase pests, labour intensive Osman et al. (2013) application implement, reduction of Striga incidence, increase soil fertility Resistant Easy to implement, high crop Purchase of seed every season is costly, gene Kouakou (2014), Naitormmbaide Varieties yield recombination's in the parasite (mutation), et al. (2015) limited of resistance sources Herbicide Reduction of Striga seed Unavailable to farmers, cost Hesammi (2013); Ransom et al. (2012) Application bank prohibitive Biocontrol agent Reduction of Striga Labour intensive, source limited Khan et al. (2010), Nzioki et al. (2016), emergence, Crop uneconomical to farmers Kountche et al. (2019) improvement of crop yield without livestock Reduction of Striga incidence, increase yield, provide livestock fed Integrated Suppressing emergence and Failure of the host's rhizosphere to maintain Ouédraogo et al. (2018), Shayanowako approach: fecundity, germination and enough pathogen levels that guarantee et al.(2018), Zarafi et al. (2015) biocontrol agent photosynthetic inhibition control of the weed. and resistant varieties Integrated Striga Reduction Striga emergence, Low adoption of these varieties, purchase of Randrianjafizanaka et al. ( 2018), Ronald Management: reduction Striga infection seed every season is costly, unavailability of et al. (2019), Schut et al. (2015) agronomic levels and seed numbers in resistant varieties to Striga species attacks, practices and the soil, Increase in yield Mutation or geographical changes that resistant varieties occur over a number of years stimulants are insensitive to the strigolactone levels produced by the resistance mechanism produce relatively low SLs, thereby inducing host (Lumba et al., 2017; Mutinda, 2018). Binding causes the deg- the germination of less parasitic seeds and consequently prevent radation of an F- box protein, which in turn activates gene regula- the host plant from parasitism. Preattachment resistance has been tory processes that lead to Striga germination (Lumba et al., 2017). shown in 'KSTP’94', an open- pollinated maize variety used by farm- It can also be due to the production of low haustorial initiation fac- ers in Eastern Africa for S. hermonthica management. This maize vari- tors whose effect leads to a failure by Striga to develop haustorium ety was shown to produce low amounts of sorgomol, a strigolactone effectively (Rich et al., 2004). Crop genotypes with preattachment that does not efficiently induce S. hermonthica germination (Karaya 200  |     YACOUBOU et Al. F I G U R E 4   Mechanisms of resistance to S. hermonthica in maize Source: Amusan et al. (2008) et al., 2012). This resistance, qualified as phenotypic resistance, been shown in the 'KSTP’94', maize open- pollinated variety (OPV) has been identified in other Striga- resistant crop genotypes (Jamil (Mutinda et al., 2018). However, the molecular mechanisms under- et al., 2011; Robert, 2011). However, resistance associated with low lying postattachment Striga resistance are unknown. Preference production of Striga seeds germination stimulant may not be related for OPV is most likely due to the prohibitive price of hybrids or lack to low production of total strigolactones, but rather to the types of of availability of hybrid seed in some SSA countries (Badu- Apraku strigolactones released (Yoneyama et al., 2010). & Fakorede, 2017). In addition, these OPV’s are more affordable In contrast, postattachment mechanisms act after Striga has and consequently easy to multiply and readily available (Midega attached and attempted to penetrate the host (Figure 4b). These et al., 2016). mechanisms result in physiological or biochemical barriers, that Although hybrids are known and desirable for their high produc- prevent Striga haustorium from connecting to the host xylem (van tivity and quality, they have shown reduced pathogen resistance Dam & Bouwmeester, 2016). Striga hermonthica postattachment re- compared to the OPVs which have innate defence traits (Schroeder sistance in maize has mainly come from its wild- grass relatives Zea et al., 2013). It is, therefore, vital to understand the genetic make- up diploperennis (Amusan et al., 2008; Lane et al., 1997) and Tripsacum of the parents used to develop hybrids as this would be more use- dactyloides (Gutierrez- Marcos et al., 2003). Post attachment re- ful for further development of improved maize germplasm with en- sistance in maize expressed by an incompatibility in ZD05 inbred hanced resistance to S. hermonthica. line with S. hermonthica has been observed (Amusan et al., 2008, 2011). In these cases, the parasite penetrated host cortex but was prevented from getting into the host endodermis. The exact mech- 3.2 | Potential sources of Striga resistance in maize anism for this parasite's inability to penetrate the endodermis re- mains unknown. This resistance could be attributed to biochemical Genetic improvement for Striga resistance depends on the avail- or physiological barriers from the host (Amusan et al., 2008; Yoshida ability of germplasm sources with different levels of resistance. & Shirasu, 2009). Recently, postattachment Striga resistance has Therefore, resistance is prioritized in maize breeding programmes YACOUBOU et Al.      |  201 for regions where Striga is endemic and causes major yield losses with the desired trait and adapted to various agro-e cological regions. to farmers. The sources of resistance to Striga have been identi- Due to Striga proneness in Eastern Africa, maize genotype 'KSTP’94' fied in maize and other crops such as rice, sorghum and cowpea has been developed and deployed as Striga tolerant source especially (Amusan et al., 2008; Haussmann et al., 2004; Mbuvi et al., 2017; in Western Kenya (Mutinda et al., 2018). 'KSTP’94' exhibits remark- Menkir, 2006; Yonli et al., 2006) (Table 2). able resistance to Striga under field conditions; a characteristic that Striga resistance in maize could be sourced from wild-g rass has made it a subject of intense research in the region as well as in relatives like Zea diploperennis and Tripsacum dactyloides (Amusan research to understand the mechanism of Striga resistance in maize. et al., 2008; Gutierrez- Marcos et al., 2003; Lane et al., 1997). Such Karaya et al. (2012) and Midega et al. (2016), have identified maize efforts have led to the development of Striga-r esistant inbred line landraces that are less affected by Striga hermonthica comparatively ZD05 suitable for integration in breeding programmes in Western to hybrids in Western Kenya. These results provide an insight into Africa (Kim, 1991). Integrating this breeding line into the breeding the potential role of landraces which could play an important role in programme, IITA in collaboration with National Agricultural Research the efforts towards an integrated management approach for Striga Systems (NARS) have focused on developing new maize genotypes in smallholder cropping systems. The potential genetic variability for TA B L E 2   Potential sources of Striga resistance Germplasm Source Name Institution References Wild- maize genes for inhibition of Tripsacum dactyloides, Linea IITA Gurney et al. (2018) relatives Strigahaustorial development Resistance Zea diploperennis, Doebley et Amusan et al. (2008) Guzman Landraces horizontal resistance Broad base KARI Midega et al. (2016) Inbred lines Resistance/tolerance TZi 3 (1368 STR), IITA Kim and Akintunde TZi 25 (9450 STR) (1989), Konate et al. (2017), Menkir et al. (2006) 9030, 1393, TESTR151, TESTR CIMMYT Karaya et al. (2014) 156, OSU231//56/44-6 - 4-1 7-3 KARI Resistance TZill, TZil2, TZi25 TZi30 IITA TZEIOR 108, TZEI 10, TZEI 17 TZISTR1174, TZISTR1162, IITA, Uganda National Simon et al. (2018) TZISTR1192 Crop Resources Research Institute, OPV IITA populations TZL comp1 synw- 1 and Acr94TZE IITA Menkir and Kling (2007) Comp s- w Resistance/tolerance TZEE- W Pop STR, TZEE- Y Pop IITA Makumbi et al. (2015), STR, 2004 TZEE-Y Pop STR Menkir, Franco, C4, TZEE- W Pop STR QPM C0 et al. (2012), Oyekunle and TZEE- W Pop STR BC2 C0; et al. (2017) TZEE- W STR 107 BC1, TZEE- W Pop STR C5, 2012 TZEE- Y DT STR C5 Striga postattachment Resistance KSTP 94, STR- VE- 216 KALRO Mutinda et al. (2018) CIMMYT Hybrids Resistant and tolerant PHB3253, PHB30G19, PHB30B50 Pioneer Chitagu et al. (2014) Resistant and tolerant MH1416, MQ623, SC643, SC527, Seed Co Nyakurwa et al. (2018) SC535 Mukushi Seeds Resistance/Tolerance TZISTR1162 × TZISTR1198 Uganda National Crop Simon et al. (2018) TZISTR1199 × TZISTR1181 Resources Research TZISTR1192 × 1368STR Institute Tolerance 8322- 13, 8321- 18 and 9022- IITA Kim and 13, TZEIOR 57 × TZEIOR Akintunde (1989), 108, TZEIOR 57 × TZEIOR Konate et al. (2017) 127, TZEIOR 13 × TZEIOR 59, TZEIOR 57 × TZEI 10 and TZEIOR 127 × TZEI 10 Abbreviations: KALO, Kenya Agricultural Livestock Research Organization (Kakamega, Kenya); KARI, Kenya Agricultural Research Institute. 202  |     YACOUBOU et Al. S. hermonthica resistance can be harnessed from wild- grass relatives, in S. hermonthica, namely ShCCD7 and ShCCD8 has been provided open pollinated, inbred as well ashybrids lines (Table 2). (Liu et al., 2014). In tobacco, the silencing of CCD7 and CCD8 genes Promising Striga resistance genotypes have been identified for has delayed the virus parasite formation in the host, indicating that further testing and experimental releases in African countries under these two genes are a key in the parasitic life cycle (Aly et al., 2014). projects such as Stress Tolerant Maize for Africa (STMA). Recently, some significant loci on chromosomes 9 and 10 of maize that are closely linked to ZmCCD1 and amt5 genes, respectively, and may be related to plant defence mechanisms against Striga parasit- 3.3 | Genetics resistance to Striga ism have been identified (Adewale et al., 2020). Availability of all this information on the type of gene action Information on the genetic basis of resistance to Striga is critical for governing the inheritance of resistance to Striga in maize genotypes plant breeding and selection. Genes action for grain yield and other would, therefore, contribute to the introgression of resistance genes agronomic traits have been reported for maize under Striga infesta- and dissemination of resistant genotypes (Akanvou & Doku, 1998). tion (Ejeta et al., 1997). Resistance evaluation is based on grain yield under Striga infestation, number of Striga plants emerged on the host and host damage syndrome rating. However, there have been 4  | METHODS FOR SCREENING Str iga contradictory reports on the gene action controlling Striga resist- RESISTANCE IN MAIZE ance in maize. It is quantitatively inherited with additive gene effects being more important than non-a dditive effects. This contributes to Development of Striga- resistant cultivars has been limited by the regulating the host plant damage syndrome rating and grain yield lack of dependable screening techniques (Yagoub et al., 2014). under Striga infestation (Kim, 1994; Berner et al., 995; Akanvou Some of the screening techniques that have been used include et al., 1997). As reported by Kim (1994) and Berner et al. (1995) dif- field techniques, screen house and laboratory methods (Rodenburg ferent genes control the number of emerged Striga plants and the et al., 2015). level of host plant damage. Moreover, there is evidence that additive Field screening is an artificial technique that consists of uniform gene action has a higher contribution to natural gene action with infestation with Striga using appropriate experimental design. The regards to grain yield and Striga traits in maize (Akaogu et al., 2013; procedure of this technique has been described in detail by Badu- Badu-A praku et al., 2015, 2016; Menkir et al., 2010). In contrast, Apraku and Fakorede (2017). Confounding effects of environmen- other studies reported that the impact of non-a dditive genes is more tal conditions on the polygenic inheritance of traits associated with important than the effect of additive genes in the control of the in- Striga resistance make field screening indispensable despite the ad- heritance of host plant damage, while the effect of additive genes vances made in laboratory and at pot experiments stage. is more important in the control of the number of emerged Striga Screen house technique has been used to screen maize gen- plants (Gethi & Smith, 2004; Badu- Apraku et al., 2007; and Yallou otypes for tolerance / resistance to Striga (Chitagu et al., 2014; et al., 2009). A recent study reported that the dominant effects sur- Nyakurwa et al., 2018; Yohannes et al., 2016). In screen houses, pass the additive effects for the number of emerged Striga plants screening for varietal resistance has been performed using pots and inheritance of Striga resistance in maize may be conditioned and buried seed studies (Eplee & Norris, 1987; Rao, 1985; Sand by non-a dditive gene action (Akaogu et al., 2019). Additionally, the et al., 1990). With regard to the pot screening techniques ‘poly bag’ involvement of epistatic effects in the inheritance of Striga resist- and seed pan, and the ‘Eplee bag’ are used (Eplee, 1992; Rao, 1985). ance aa in maize has been reported (Adetimirin et al., 2001; Akaogu The most important aspect in screen house evaluation is its compat- et al., 2019). Unlike maize, the progress in the identification of genes ibility with experiments on the efficiency in controlling the Striga for marker-a ssisted selection in other crops such as sorghum and vector (Kountche et al., 2019). Several studies have also demon- rice is substantial. The identification of lg gene mutant alleles at strated the validity of the Eplee bag technique as a good screening the LGS1 (Low Germination Stimulant 1) locus on chromosome 5 of method (Ahonsi et al., 2002; Yonli et al., 2006). Previously, pot ex- sorghum has reduced significantly the S. hermonthica germination periments were used to access the level of parasite variation in the stimulant activity (Gobena et al., 2017). This gene was found to code attachment to the roots of diverse maize inbred lines alongside the for a sulfo- transferase enzyme and when silenced led to a change plant host interaction (Menkir et al., 2006). in 5-d eoxystrigol into orobanchol compounds in the root exudates Laboratory methods employed in Striga research have proven (Gobena et al., 2017). In addition, other loci have been reported to be the best option so far for screening infection. The use of to play important roles in parasitic resistance, including the genes laboratory-b ased assays has provided interactive biological pro- CCD1, CCD7, CCD8, DAD2, MAX1, DWARF 53 (D53) and LBO (Sun cesses between Striga and the roots of the host plants during each et al., 2008; Hamiaux et al., 2012; Zhou et al. 2013; Aly et al., 2014; individual stage of the parasitism process. Hess et al. (1992) devel- Zhang et al, 2014; Brewer et al., 2016). In maize, roots with mycorrhi- oped an in vitro laboratory assay termed such as the agar gel assay zal formations have shown a higher ZmCCD1 expression and induced (AGA) to determine the genotypic efficacy of host root exudates lower germination of Striga (Sun et al., 2008). Evidence for strigo- to germinate preconditioned Striga seeds. This system gave a good lactones and strigolactone perception genes of the MAX-2 - type correlation with field resistance (Hess et al., 1992; Ramaiah, 1987). YACOUBOU et Al.      |  203 These growth systems have been used to examine the architecture of susceptible cultivars (Menkir et al., 2004). It is, therefore, relevant to host roots and their biochemical mechanisms of resistance (Amusan explore the applicability of many conventional breeding techniques et al., 2011; Mohamed et al., 2010; Mrema et al., 2017). Kountche generally used in various Striga resistance- breeding programmes. et al. (2019) used AGA to assess the germination-i nducing activity Recurrent selection is designed to increase the frequency of selected strigolactones (SLs) analogues on S. hermonthica seeds. of favourable alleles in a population (Hallauer, 1992; Hallauer & AGA is useful for screening maize genotypes with a high degree of Carena, 2012; Badu- Apraku & Fakorode, 2017). This procedure has success in identifying Striga- resistant varieties especially those em- been used effectively in maize to improve quantitatively inherited anating from the wild-s pecies relatives such as Z. diploperennis and T. traits (Badu- Apraku, 2010; Menkir & Kling, 2007). Few studies have dactyloides (Amusan et al., 2011; Gurney et al., 2003, 2006; Karaya been conducted on the effectiveness of recurrent selection in im- et al., 2012 ). More recently, AGA experiments have been used to de- proving the level of Striga resistance in maize (Menkir & Kling, 2007). termine the levels of resistance or tolerance of new quality protein Recurrent selection methods capitalize on additive gene action under maize genotypes to S. asiatica (Nyakurwa et al., 2018). an effective and reliable artificial method of Striga infestation for Furthermore, the rhizotron screening system has been proposed the screening of progenies. It facilitates the accumulation of Striga as an ideal technique to circumvent the limits of field technique and resistance genes to develop germplasm with multigenic resistance initiate a reliable postattachment screening (Rodenburg et al., 2015). that could be sustainable over time and effective for the control of Rhizotrons are transparent root observation chambers that enable the parasitic weed (Badu- Apraku et al., 2012; Menkir & Kling, 2007). Striga attached to the host plant to be counted. The AGA technique Recurrent selection has been used successfully to improve grain also allows the evaluation of resistance mechanisms phenotype and yield and other agronomic traits in maize populations under infes- determination of the effect of Striga on host biomass over a period tation (Badu-A praku, 2010; Menkir et al., 2004). Through recurrent of time with minimal disturbance (Rodenburg et al., 2015; Runo selection, researchers have reported genetic gains in maize grain et al., 2012). Rhizotron Perspex chambers have been extensively yield cultivars under Striga infestation. Menkir et al. (2004) observed used to screen a variety of host species including maize (Mutinda that over 2 years selection, Striga damage symptoms were reduced et al., 2018). by 3% per cycle, number of emerged Striga plants by 10% per cycle and grain yield increased by 16% per cycle under Striga infestation conditions. Within two periods of selection (1988– 2000 and 2001– 5  | BREEDING APPROACHES USED FOR 2006), recurrent selection improved the annual gain yield from Str iga RESISTANCE IN MAIZE 0.86% to 2.11% in early maize under Striga infestation (Badu- Apraku et al., 2013). This approach has led to an increase in genetic gains in Considerable efforts have been made in breeding for Striga resist- grain yield of 498 kgha−1 cycle−1 (16.9% cycle−1) in 3 years (2014– ance in cereals especially in maize and significant progress has been 2017) under Striga infestation (Badu- Apraku et al., 2019). More re- achieved in the development of improved varieties. After the iden- cently, genetic gains in maize grain yield and other agronomic traits tification of a potential source of resistance, the next critical step under Striga condition for periods of selection have been reported. in the breeding programme depends on the breeder's ability to in- Using recurrent selection, traits associated with grain yield includ- corporate the resistance genes into the best-a dapted varieties. This ing plant height and the number of ears per plant increased, ear as- can be performed with several strategies, amongst which are the pect and anthesis– silking interval decreased over time under Striga conventional and or classical breeding and the marker- assisted se- condition (Menkir & Meseka, 2019). The authors observed that on lection (MAS). average, hybrids developed after the 1990s yielded 64% more and displayed 61% less parasite emergence and 30% less parasite dam- age at 10 weeks after planting compared with hybrids developed 5.1 | Conventional breeding for Striga resistance before the 1990s. The half- sibling selection scheme is also one of the easiest ways Conventional plant breeding aims at increasing the chances of se- in developing composite populations with at least moderate re- lecting individuals from populations generated from genetic mating sistance to S. hermonthica (John & Sleeper, 1995). The full sib and designs. Selection has usually been carried out at the whole- plant selection from S1 progeny tests allows for an increased scope of level thereby, representing the net result of the interaction between variability in progeny from source populations and greater control genotype and environment (Badu-A praku et al., 2017). However, over pollen, and should translate into an increased frequency of fa- identification of potential sources of resistance is the first step of all vourable alleles for Striga resistance in populations under selection Striga breeding programmes. To access the genes for resistance and (Hallauer, 1992; Menkir et al., 2004). incorporate them into well-a dapted varieties, conventional breed- The backcross breeding procedure is straight forward if a ing relies on techniques such as recurrent selection, half- sib or full- source population or donor, with a high frequency of desirable sib selection, S1 family and F1 family (hybrid) selection schemes. alleles for Striga resistance is available. Therefore, rapid progress Conventional breeding techniques were predominantly used in con- can be achieved in building resistance to Striga if a donor exhibit- ferring superior combinations of Striga resistance alleles amongst ing high dominance for Striga resistance genes is identified. Under 204  |     YACOUBOU et Al. such condition, ideal recurrent parents would be genotypes com- Several researchers have reported the efficiency and superi- bining early maturity and high yield (Badu- Apraku et al., 2017). ority of MAS and its effective integration into mainstream maize Germplasm derived through the backcross method forms the basis breeding programmes. Efforts deployed with the use of molecular for cultivar advancements towards achieving polygenic resistance tools can be utilized in determining families that can be bulked or to S. hermonthica. Such inbred from Z. diploperennis and tropical discarded. Those families could also help in the selection of parental maize have been essential in the development of S. hermonthica- lines for Striga- resistant hybrids development with high yields and resistant open- pollinated populations like Zea diplo SYNW- 1, TZL stable across many agroecologies (Akinwale et al., 2014; Mengesha Comp SYNW- 1. Partial resistance to S. hermonthica was also ob- et al., 2017). served in backcross hybrids from a resistant donor T. dactyloides Molecular marker technologies and the construction of genetic (Gurney et al., 2018). linkage maps have made it possible to detect genetic loci associated Despite the low costs and yield stability benefits associated with with complex traits (Kang et al., 1998; Sibov et al., 2003). Genetic the recurrent use of synthetic maize populations, the superiority linkage maps and quantitative trait loci (QTL) mapping technology in performance of hybrid cultivars is being acknowledged with an have enhanced the efficiency of estimating the number of loci con- increasing trend amongst southern African farmers (Badu-A praku trolling genetic variation in a segregating population and the charac- & Fakorede, 2017). The desire to increase maize yields under mar- terization of the map positions in the genome (Xiao et al., 1996). In ginal growing conditions and a rise in literacy can be the major rea- maize, QTLs identification was focused mainly on abiotic and biotic sons behind the increase towards the complete adoption of hybrid stresses such as drought tolerance (Semagn et al., 2015; Tuberosa technology in countries like Zimbabwe, Ghana, Mali and Nigeria et al., 2002), low soil nitrogen (Mandolino et al., 2018; Ribeiro (STMA, 2019). Heterosis of hybrid varieties can be useful in miti- et al., 2018), pests (Jiménez- Galindo et al., 2017) and foliar dis- gating the effect of Striga on maize productivity. With the increased eases (Gowda et al., 2018). In SSA, little progress has been reported use of hybrid maize seed in West and Central Africa (WCA), Menkir on the detection of QTLs or genes for Striga resistance in maize. et al. (2004) have selected S. hermonthica- resistant hybrids by cross- However, QTLs for resistance to S. hermonthica have been identi- ing diverse inbred lines. These hybrids are able to suppress para- fied from local populations including wild relatives and successfully site emergence, with some of them producing high grain yield under transferred through backcross breeding into adaptable maize pop- high Striga infestation levels (Menkir et al., 2012b). However, multi- ulations (Rich & Ejeta, 2008). Using the linkage mapping method, location field screening for Striga resistance resulted in significant two putative QTLs have been discovered that govern incompatible genotype × environment (G × E) interactions for Striga resistance response to Striga parasitism in maize amongst F2 segregated popu- traits in maize trials (Akinwale et al., 2014; Nyakurwa et al., 2018; lations (Amusan, 2010). Whereas some QTLs have been discovered Simon et al., 2018). Based on these results, there is a need to select for Striga resistance in sorghum and rice (Atera et al., 2015; Yasir & for specific adaptation in Striga resistance breeding, particularly in Abdalla, 2013; Yohannes et al., 2015; Ali et al., 2016). Using genomic the case of contrasting environment where different putative Striga association wide (GWA), 24 SNPS markers associated with grain ecotypes may exist. yield, Striga damage at 8 and 10 weeks after planting (WAP), ears per plant and ear aspect under Striga infestation were detected in early maturing maize inbred (Adewale et al., 2020). Therefore, there is an 5.2 | Marker-a ssisted breeding for Striga resistance urgent need to identify QTLs for Striga resistance to facilitate the rapid and efficient transfer of the genes into other maize genotypes. Marker- assisted selection (MAS) is an indirect selection process where a trait of interest is selected based on a marker linked to the trait, rather than on the trait itself (Ribaut et al., 2001). This breed- 6  | WAY FORWARD ON Str iga RESISTANCE ing method allows the performance of a selected phenotype to be IN MAIZE AND CONCLUSION predicted based on the use of molecular markers at early generation. Application of molecular markers has provided significant op- Breeding maize for Striga resistance is challenging due to the scarcity portunities for breeders to characterize, evaluate and select maize of resistant sources in cultivated species. In this review, we explored germplasm widely used by public and private sectors. Molecular the integrated approach using resistant cultivars is the most effective markers are also used for screening crop genotypes for tolerance option, since Striga- resistant cultivars play a major role in reducing to biotic or abiotic stress. Using SSRs and SNPs markers, some elite Striga pressure, both in terms of Striga count and vigour compared genotypes for the breeding of Striga resistance are selected and with individual control options. In general, many breeding tech- new makers have been identified, which significantly contributed niques are used in maize breeding programmes for Striga resistance. to the differentiation of Striga tolerant and susceptible genotypes However, conventional breeding techniques through the screening of (Bawa et al., 2015; Shayanowako et al., 2018). Molecular markers resistant genotypes are the most frequently used in the maize breed- can better help in the assessment of relatedness in isogenic lines to ing programmes in Africa. Screening of resistant genotypes under ar- determine families that can be bulked or discarded, which in turn can tificial Striga infestation is very expensive, time- consuming and labour reduce maintenance costs (Dean et al., 1999). intensive. Moreover, obtained results are often not consistent due to YACOUBOU et Al.      |  205 genotype by environment interactions, inability to assess evenness Adewale, S. A., Badu- Apraku, B., Akinwale, R. O., Paterne, A. A., Gedil, of Striga distribution and ascertain contact between Striga and host M., & Garcia- Oliveira, A. L. (2020). Genome- wide association study of Striga resistance in early maturing white tropical maize inbred roots. lines. BMC Plant Biology, 20, 203. Another possibility is to develop high yielding maize genotypes Ahonsi, M. O., Berner, D. K., Emechebe, A. M., & Lagoke, S. T. (2002). with resistance to Striga using genome editing of SLs genes, which Selection of rhizobacterial strains for suppression of germination are responsible for Striga germination and attachment. It might be a of Striga hermonthica (DEL.) Benth. seeds. Biological Control, 24(2), 143–1 52. https://doi.org/10.1016/S1049 - 9644(02)00019- 1 direct way of increasing maize grain yield in Striga endemic locations Akanvou, L., Doku, E. V., & Kling, J. G. (1997). Estimates of genetic of SSA. At present, accumulation of resistance QTLs in most pro- variances and interrelationships of traits associated with Striga re- grammes may be facilitated by conventional breeding techniques and sistance in maize. African Crop Science Journal, 5, 1–8 . https://doi. the use of cost- effective molecular markers (Badu- Apraku & Fakorede, org/10.4314/acsj.v5i1.27864 Akanvou, L., & Doku, E. V. (1998). Heritability of traits associated with 2017). The present challenge is to convert a large amount of avail- Striga (Striga hermonthica (Del.) Benth.) resistance in an open polli- able genetic information into a large set of markers useful for Striga nated maize population. African Crop Science Journal, 6(2), 129– 135. resistance breeding in maize and to integrate such markers into a sus- https://doi.org/10.4314/acsj.v6i2.27808 tainable breeding scheme. Further exploration of closely related QTL Akaogu, I. C., Badu- Apraku, B., Adetimirin, V. O., Vroh- Bi, I., Oyekunle, gene markers related to Striga will help in the effective trait pyramid- M., & Akinwale, R. O. (2013). Genetic diversity assessment of extra- early maturing yellow maize inbreds and hybrid performance in ing gene actions that can contribute to maize effective production. Striga-i nfested and Striga- free environments. Journal of Agricultural Some effective molecular docking approaches such as CRISPR/Cas9 Science, 151(4), 519–5 37. https://doi.org/10.1017/S00218 5961 genome editing of strigolactone genes, which are responsible for Striga 2000652 germination and attachment could also be considered for the develop- Akaogu, I. C., Badu-A praku, B., Tongoona, P., Ceballos, H., Gracen, V., Offei, S. K., & Dzidzienyo, D. (2019). Inheritance of Striga her- ment of high yielding maize genotypes with resistance to Striga. monthica adaptive traits in an early- maturing white maize inbred line containing resistance genes from Zea diploperennis. Plant Breeding, ACKNOWLEDG EMENTS 138(5), 546– 552. https://doi.org/10.1111/pbr.12707 Laboratoire de Phytotechnie, d'Amélioration et de Protection Akinwale, R. O., Badu- Apraku, B., Fakorede, M. A. B., & Vroh- Bi, I. (2014). Heterotic grouping of tropical early- maturing maize inbred lines des Plantes (LaPAPP), Département des Sciences et Techniques based on combining ability in Striga- infested and Striga-f ree envi- de Production Végétale, Faculté d'Agronomie de l'Université de ronments and the use of SSR markers for genotyping. Field Crops Parakou and the Stress Tolerant Maize for Africa Project are highly Research, 156, 48–6 2. https://doi.org/10.1016/j.fcr.2013.10.015 acknowledged. The authors express their appreciation to all scientist Ali, R., Hash, C. T., Damaris, O., Elhussein, A., & Mohamed, A. H. (2016). Introgression of striga resistance into popular Sudanese sorghum va- involved in the improvement of this manuscript. We acknowledge rieties using marker assisted selection. World Journal of Biotechnology, financial support for the Bill and Melinda Gates Foundation. 1, 48–5 5. www.scipl atform.com/wjb Aly, R., Dubey, N. K., Yahyaa, M., Abu- Nassar, J., & Ibdah, M. (2014). Gene CONFLIC T OF INTERE S TS silencing of CCD7 and CCD8 in Phelipanche aegyptiaca by tobacco rattle virus system retarded the parasite development on the host. The authors declare that there is no conflict of interests. Plant Signaling & Behavior, 9(8), e29376. Amusan, I., Rich, P., Housley, T., & Ejeta, G. (2011). 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