AquaPath: a web-based user interface for rapid identification of aquaculture pathogens based on long-read DNA sequence data
Citation
CGIAR Platform for Big Data in Agriculture. 2021. AquaPath: a web-based user interface for rapid identification of aquaculture pathogens based on long-read DNA sequence data. Reported in Platform for Big Data in Agriculture Annual Report 2021. Innovations.
Abstract/Description
Currently AquaPath features three identification tools that cover (1) major sequence type of piscine Group B Streptococcus (GBS), (2) most serotype of GBS and (3) major biotype of Yersinia ruckeri. AquaPath is still under development and more tools will be developed to cover additional bacterial species. https://worldfishcenter.github.io/rappseq/identify/
Permanent link to cite or share this item
External link to download this item
DOI
Collections
Type
Review Status
Language
en
