A comprehensive analysis of Trehalose-6-phosphate synthase (TPS) gene for salinity tolerance in chickpea (Cicer arietinum L.)

Simple item page
cg.contributor.affiliationInternational Center for Agricultural Research in the Dry Areas
cg.contributor.affiliationIndian Council of Agricultural Research, Indian Agricultural Research Institute
cg.contributor.affiliationUnited Arab Emirate University
cg.contributor.affiliationIndian Council of Agricultural Research, Indian Institute of Pulses Research
cg.contributor.affiliationThe University of Western Australia
cg.contributor.affiliationMurdoch University
cg.contributor.affiliationPunjab Agricultural University
cg.contributor.affiliationIndian Council of Agricultural Research, National Research Centre on Plant Biotechnology
cg.contributor.affiliationBanasthali University
cg.contributor.affiliationRani Lakshmi Bai Central Agricultural University
cg.contributor.donorCGIAR Trust Fund
cg.contributor.initiativeFragility to Resilience in Central and West Asia and North Africa
cg.creator.identifierRoorkiwal, Manish: 0000-0001-6595-281X
cg.creator.identifierHamwieh, Aladdin: 0000-0001-6060-5560
cg.identifier.doihttps://doi.org/10.1038/s41598-022-20771-x
cg.isijournalISI Journal
cg.issn2045-2322
cg.journalScientific Reports
cg.number16315
cg.reviewStatusPeer Review
cg.subject.actionAreaResilient Agrifood Systems
cg.subject.impactAreaNutrition, health and food security
cg.subject.sdgSDG 2 - Zero hunger
cg.volume12
dc.contributor.authorKumar, Tapan
dc.contributor.authorTiwari, Neha
dc.contributor.authorChellapilla, Bharadwaj
dc.contributor.authorRoorkiwal, Manish
dc.contributor.authorPappula, Sneha Priya Reddy
dc.contributor.authorPatil, B. S.
dc.contributor.authorKumar, Sudhir
dc.contributor.authorHamwieh, Aladdin
dc.contributor.authorT, Vinutha
dc.contributor.authorBindra, Shayla
dc.contributor.authorSingh, Inderjit
dc.contributor.authorAlam, Afroz
dc.contributor.authorChaturvedi, Sushil Kumar
dc.contributor.authorKumar, Yogesh
dc.contributor.authorNimmy, M S
dc.contributor.authorSiddique, Kadambot H M
dc.contributor.authorVarshney, Rajeev
dc.date.accessioned2023-01-12T22:12:18Zen
dc.date.available2023-01-12T22:12:18Zen
dc.identifier.urihttps://hdl.handle.net/10568/127009
dc.titleA comprehensive analysis of Trehalose-6-phosphate synthase (TPS) gene for salinity tolerance in chickpea (Cicer arietinum L.)en
dcterms.abstractSoil salinity affects various crop cultivation but legumes are the most sensitive to salinity. Osmotic stress is the first stage of salinity stress caused by excess salts in the soil on plants which adversely affects the growth instantly. The Trehalose-6-phosphate synthase (TPS) genes play a key role in the regulation of abiotic stresses resistance from the high expression of different isoform. Selected genotypes were evaluated to estimate for salt tolerance as well as genetic variability at morphological and molecular level. Allelic variations were identified in some of the selected genotypes for the TPS gene. A comprehensive analysis of the TPS gene from selected genotypes was conducted. Presence of significant genetic variability among the genotypes was found for salinity tolerance. This is the first report of allelic variation of TPS gene from chickpea and results indicates that the SNPs present in these conserved regions may contribute largely to functional distinction. The nucleotide sequence analysis suggests that the TPS gene sequences were found to be conserved among the genotypes. Some selected genotypes were evaluated to estimate for salt tolerance as well as for comparative analysis of physiological, molecular and allelic variability for salt responsive gene Trehalose-6-Phosphate Synthase through sequence similarity. Allelic variations were identified in some selected genotypes for the TPS gene. It is found that Pusa362, Pusa1103, and IG5856 are the most salt-tolerant lines and the results indicates that the identified genotypes can be used as a reliable donor for the chickpea improvement programs for salinity tolerance.en
dcterms.accessRightsOpen Access
dcterms.available2022-09-29
dcterms.bibliographicCitationTapan Kumar, Neha Tiwari, Bharadwaj Chellapilla, Manish Roorkiwal, Sneha Priya Reddy Pappula, B. S. Patil, Sudhir Kumar, Aladdin Hamwieh, Vinutha T, Shayla Bindra, Inderjit Singh, Afroz Alam, Sushil Kumar Chaturvedi, Yogesh Kumar, M S Nimmy, Kadambot H M Siddique, Rajeev Varshney. (29/9/2022). A comprehensive analysis of Trehalose-6-phosphate synthase (TPS) gene for salinity tolerance in chickpea (Cicer arietinum L. ). Scientific Reports, 12.en
dcterms.formatPDFen
dcterms.languageen
dcterms.licenseCC-BY-4.0
dcterms.publishernature portfolio
dcterms.subjectfood securityen
dcterms.subjecthealthen
dcterms.subjectnutritionen
dcterms.subjectsoil salinityen
dcterms.subjectchickpeasen
dcterms.subjectgoal 2 zero hungeren
dcterms.subjectchickpeaen
dcterms.subjectcicer arietinum l.en
dcterms.typeJournal Article

Files

Original bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
da37eac84f077251163f2dc0d277de70.pdf
Size:
2.44 MB
Format:
Adobe Portable Document Format
Description:
Journal Article
Download

Collections

CGIAR Initiative on Fragility to Resilience in Central and West Asia and North Africa
ICARDA Articles in Journals
ICARDA Publications